CRAN Package Check Results for Package adjclust

Last updated on 2018-01-21 16:48:53 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.5.2 17.40 329.45 346.85 OK
r-devel-linux-x86_64-debian-gcc 0.5.2 16.05 249.42 265.47 OK
r-devel-windows-ix86+x86_64 0.5.2 42.00 457.00 499.00 OK
r-patched-linux-x86_64 0.5.2 18.03 359.55 377.58 OK
r-patched-solaris-x86 0.5.2 764.60 NOTE
r-release-linux-x86_64 0.5.2 18.47 355.84 374.31 OK
r-release-windows-ix86+x86_64 0.5.2 70.00 505.00 575.00 OK
r-release-osx-x86_64 0.5.2 ERROR
r-oldrel-windows-ix86+x86_64 0.5.2 53.00 448.00 501.00 WARN
r-oldrel-osx-x86_64 0.5.2 NOTE

Check Details

Version: 0.5.2
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘Matrix’
     All declared Imports should be used.
Flavors: r-patched-solaris-x86, r-oldrel-osx-x86_64

Version: 0.5.2
Check: package dependencies
Result: ERROR
    Packages required but not available: ‘snpStats’ ‘HiTC’
    
    Package suggested but not available for checking: ‘BiocStyle’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64

Version: 0.5.2
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
     as.data.frame, cbind, colnames, do.call, duplicated, eval,
     evalq, get, grep, grepl, intersect, is.unsorted, lapply,
     lengths, mapply, match, mget, order, paste, pmax, pmax.int,
     pmin, pmin.int, rank, rbind, rownames, sapply, setdiff, sort,
     table, tapply, union, unique, unsplit, which, which.max,
     which.min
    
    Loading required package: S4Vectors
    Loading required package: stats4
    
    Attaching package: 'S4Vectors'
    
    The following objects are masked from 'package:base':
    
     colMeans, colSums, expand.grid, rowMeans, rowSums
    
    Loading required package: GenomicRanges
    Loading required package: GenomeInfoDb
    minrange= 1 - maxrange= 10
    Bin size 'xgi' =501579 [1x501579]
    Bin size 'ygi' =501579 [1x501579]
    minrange= 12 - maxrange= 1022
    Error: processing vignette 'hicClust.Rmd' failed with diagnostics:
    path for html_dependency not found:
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64