CRAN Package Check Results for Package futile.matrix

Last updated on 2018-02-21 05:48:35 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2.6 2.95 19.78 22.73 ERROR
r-devel-linux-x86_64-debian-gcc 1.2.6 2.40 15.58 17.98 ERROR
r-devel-linux-x86_64-fedora-clang 1.2.6 26.96 OK
r-devel-linux-x86_64-fedora-gcc 1.2.6 25.49 OK
r-devel-windows-ix86+x86_64 1.2.6 5.00 29.00 34.00 OK
r-patched-linux-x86_64 1.2.6 2.35 19.70 22.05 ERROR
r-patched-solaris-x86 1.2.6 36.00 OK
r-release-linux-x86_64 1.2.6 2.14 19.84 21.98 ERROR
r-release-windows-ix86+x86_64 1.2.6 7.00 32.00 39.00 OK
r-release-osx-x86_64 1.2.6 OK
r-oldrel-windows-ix86+x86_64 1.2.6 6.00 38.00 44.00 OK
r-oldrel-osx-x86_64 1.2.6 OK

Check Details

Version: 1.2.6
Check: tests
Result: ERROR
     Running ‘doRUnit.R’ [2s/3s]
    Running the tests in ‘tests/doRUnit.R’ failed.
    Complete output:
     > # From http://rwiki.sciviews.org/doku.php?id=developers:runit
     > ## unit tests will not be done if RUnit is not available
     >
     > # Unit tests are currently failing due to scoping issues
     > if(require("RUnit", quietly=TRUE)) {
     +
     + ## --- Setup ---
     +
     + pkg <- "futile.matrix" # <-- Change to name!
     + if(Sys.getenv("RCMDCHECK") == "FALSE") {
     + ## Path to unit tests for standalone running under Makefile (not R CMD check)
     + ## PKG/tests/../inst/unitTests
     + path <- file.path(getwd(), "..", "inst", "unitTests")
     + } else {
     + ## Path to unit tests for R CMD check
     + ## PKG.Rcheck/tests/../PKG/unitTests
     + path <- system.file(package=pkg, "unitTests")
     + }
     + cat("\nRunning unit tests\n")
     + print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
     +
     + library(package=pkg, character.only=TRUE)
     +
     + ## If desired, load the name space to allow testing of private functions
     + ## if (is.element(pkg, loadedNamespaces()))
     + ## attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
     + ##
     + ## or simply call PKG:::myPrivateFunction() in tests
     +
     + ## --- Testing ---
     +
     + ## Define tests
     + testSuite <- defineTestSuite(name=paste(pkg, "unit testing"),
     + dirs=path)
     + ## Run
     + tests <- runTestSuite(testSuite)
     +
     + ## Default report name
     + pathReport <- file.path(path, "report")
     +
     + ## Report to stdout and text files
     + cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
     + printTextProtocol(tests, showDetails=FALSE)
     + printTextProtocol(tests, showDetails=FALSE,
     + fileName=paste(pathReport, "Summary.txt", sep=""))
     + printTextProtocol(tests, showDetails=TRUE,
     + fileName=paste(pathReport, ".txt", sep=""))
     +
     + ## Report to HTML file
     + printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
     +
     + ## Return stop() to cause R CMD check stop in case of
     + ## - failures i.e. FALSE to unit tests or
     + ## - errors i.e. R errors
     + tmp <- getErrors(tests)
     + if(tmp$nFail > 0 | tmp$nErr > 0) {
     + stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
     + ", #R errors: ", tmp$nErr, ")\n\n", sep=""))
     + }
     + } else {
     + warning("cannot run unit tests -- package RUnit is not available")
     + }
    
     Running unit tests
     $pkg
     [1] "futile.matrix"
    
     $getwd
     [1] "/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/futile.matrix.Rcheck/tests"
    
     $pathToUnitTests
     [1] "/tmp/RtmpCvKcTj/RLIBS_3b5a1fd151a2/futile.matrix/unitTests"
    
    
    
     Executing test function test.cutoff_kernel_1 ... done successfully.
    
    
    
     Executing test function test.cutoff_kernel_2 ... done successfully.
    
    
    
     Executing test function test.fit.density_1 ... done successfully.
    
    
    
     Executing test function test.fit.density_2 ... done successfully.
    
    
    
     Executing test function test.max_eigen ... done successfully.
    
     ------------------- UNIT TEST SUMMARY ---------------------
    
     RUNIT TEST PROTOCOL -- Tue Feb 20 07:46:11 2018
     ***********************************************
     Number of test functions: 5
     Number of errors: 0
     Number of failures: 0
    
    
     1 Test Suite :
     futile.matrix unit testing - 5 test functions, 0 errors, 0 failures
     Error in file(file, ifelse(append, "a", "w")) :
     cannot open the connection
     Calls: printTextProtocol -> cat -> file
     In addition: Warning message:
     In file(file, ifelse(append, "a", "w")) :
     cannot open file '/tmp/RtmpCvKcTj/RLIBS_3b5a1fd151a2/futile.matrix/unitTests/reportSummary.txt': Read-only file system
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.2.6
Check: tests
Result: ERROR
     Running ‘doRUnit.R’ [1s/2s]
    Running the tests in ‘tests/doRUnit.R’ failed.
    Complete output:
     > # From http://rwiki.sciviews.org/doku.php?id=developers:runit
     > ## unit tests will not be done if RUnit is not available
     >
     > # Unit tests are currently failing due to scoping issues
     > if(require("RUnit", quietly=TRUE)) {
     +
     + ## --- Setup ---
     +
     + pkg <- "futile.matrix" # <-- Change to name!
     + if(Sys.getenv("RCMDCHECK") == "FALSE") {
     + ## Path to unit tests for standalone running under Makefile (not R CMD check)
     + ## PKG/tests/../inst/unitTests
     + path <- file.path(getwd(), "..", "inst", "unitTests")
     + } else {
     + ## Path to unit tests for R CMD check
     + ## PKG.Rcheck/tests/../PKG/unitTests
     + path <- system.file(package=pkg, "unitTests")
     + }
     + cat("\nRunning unit tests\n")
     + print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
     +
     + library(package=pkg, character.only=TRUE)
     +
     + ## If desired, load the name space to allow testing of private functions
     + ## if (is.element(pkg, loadedNamespaces()))
     + ## attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
     + ##
     + ## or simply call PKG:::myPrivateFunction() in tests
     +
     + ## --- Testing ---
     +
     + ## Define tests
     + testSuite <- defineTestSuite(name=paste(pkg, "unit testing"),
     + dirs=path)
     + ## Run
     + tests <- runTestSuite(testSuite)
     +
     + ## Default report name
     + pathReport <- file.path(path, "report")
     +
     + ## Report to stdout and text files
     + cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
     + printTextProtocol(tests, showDetails=FALSE)
     + printTextProtocol(tests, showDetails=FALSE,
     + fileName=paste(pathReport, "Summary.txt", sep=""))
     + printTextProtocol(tests, showDetails=TRUE,
     + fileName=paste(pathReport, ".txt", sep=""))
     +
     + ## Report to HTML file
     + printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
     +
     + ## Return stop() to cause R CMD check stop in case of
     + ## - failures i.e. FALSE to unit tests or
     + ## - errors i.e. R errors
     + tmp <- getErrors(tests)
     + if(tmp$nFail > 0 | tmp$nErr > 0) {
     + stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
     + ", #R errors: ", tmp$nErr, ")\n\n", sep=""))
     + }
     + } else {
     + warning("cannot run unit tests -- package RUnit is not available")
     + }
    
     Running unit tests
     $pkg
     [1] "futile.matrix"
    
     $getwd
     [1] "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/futile.matrix.Rcheck/tests"
    
     $pathToUnitTests
     [1] "/tmp/RtmpmZuZy1/RLIBS_60cf15f6ea30/futile.matrix/unitTests"
    
    
    
     Executing test function test.cutoff_kernel_1 ... done successfully.
    
    
    
     Executing test function test.cutoff_kernel_2 ... done successfully.
    
    
    
     Executing test function test.fit.density_1 ... done successfully.
    
    
    
     Executing test function test.fit.density_2 ... done successfully.
    
    
    
     Executing test function test.max_eigen ... done successfully.
    
     ------------------- UNIT TEST SUMMARY ---------------------
    
     RUNIT TEST PROTOCOL -- Tue Feb 20 18:30:05 2018
     ***********************************************
     Number of test functions: 5
     Number of errors: 0
     Number of failures: 0
    
    
     1 Test Suite :
     futile.matrix unit testing - 5 test functions, 0 errors, 0 failures
     Error in file(file, ifelse(append, "a", "w")) :
     cannot open the connection
     Calls: printTextProtocol -> cat -> file
     In addition: Warning message:
     In file(file, ifelse(append, "a", "w")) :
     cannot open file '/tmp/RtmpmZuZy1/RLIBS_60cf15f6ea30/futile.matrix/unitTests/reportSummary.txt': Read-only file system
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.2.6
Check: tests
Result: ERROR
     Running ‘doRUnit.R’ [2s/3s]
    Running the tests in ‘tests/doRUnit.R’ failed.
    Complete output:
     > # From http://rwiki.sciviews.org/doku.php?id=developers:runit
     > ## unit tests will not be done if RUnit is not available
     >
     > # Unit tests are currently failing due to scoping issues
     > if(require("RUnit", quietly=TRUE)) {
     +
     + ## --- Setup ---
     +
     + pkg <- "futile.matrix" # <-- Change to name!
     + if(Sys.getenv("RCMDCHECK") == "FALSE") {
     + ## Path to unit tests for standalone running under Makefile (not R CMD check)
     + ## PKG/tests/../inst/unitTests
     + path <- file.path(getwd(), "..", "inst", "unitTests")
     + } else {
     + ## Path to unit tests for R CMD check
     + ## PKG.Rcheck/tests/../PKG/unitTests
     + path <- system.file(package=pkg, "unitTests")
     + }
     + cat("\nRunning unit tests\n")
     + print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
     +
     + library(package=pkg, character.only=TRUE)
     +
     + ## If desired, load the name space to allow testing of private functions
     + ## if (is.element(pkg, loadedNamespaces()))
     + ## attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
     + ##
     + ## or simply call PKG:::myPrivateFunction() in tests
     +
     + ## --- Testing ---
     +
     + ## Define tests
     + testSuite <- defineTestSuite(name=paste(pkg, "unit testing"),
     + dirs=path)
     + ## Run
     + tests <- runTestSuite(testSuite)
     +
     + ## Default report name
     + pathReport <- file.path(path, "report")
     +
     + ## Report to stdout and text files
     + cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
     + printTextProtocol(tests, showDetails=FALSE)
     + printTextProtocol(tests, showDetails=FALSE,
     + fileName=paste(pathReport, "Summary.txt", sep=""))
     + printTextProtocol(tests, showDetails=TRUE,
     + fileName=paste(pathReport, ".txt", sep=""))
     +
     + ## Report to HTML file
     + printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
     +
     + ## Return stop() to cause R CMD check stop in case of
     + ## - failures i.e. FALSE to unit tests or
     + ## - errors i.e. R errors
     + tmp <- getErrors(tests)
     + if(tmp$nFail > 0 | tmp$nErr > 0) {
     + stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
     + ", #R errors: ", tmp$nErr, ")\n\n", sep=""))
     + }
     + } else {
     + warning("cannot run unit tests -- package RUnit is not available")
     + }
    
     Running unit tests
     $pkg
     [1] "futile.matrix"
    
     $getwd
     [1] "/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/futile.matrix.Rcheck/tests"
    
     $pathToUnitTests
     [1] "/tmp/RtmpDcIBap/RLIBS_5e0ea287caa/futile.matrix/unitTests"
    
    
    
     Executing test function test.cutoff_kernel_1 ... done successfully.
    
    
    
     Executing test function test.cutoff_kernel_2 ... done successfully.
    
    
    
     Executing test function test.fit.density_1 ... done successfully.
    
    
    
     Executing test function test.fit.density_2 ... done successfully.
    
    
    
     Executing test function test.max_eigen ... done successfully.
    
     ------------------- UNIT TEST SUMMARY ---------------------
    
     RUNIT TEST PROTOCOL -- Tue Feb 20 19:40:50 2018
     ***********************************************
     Number of test functions: 5
     Number of errors: 0
     Number of failures: 0
    
    
     1 Test Suite :
     futile.matrix unit testing - 5 test functions, 0 errors, 0 failures
     Error in file(file, ifelse(append, "a", "w")) :
     cannot open the connection
     Calls: printTextProtocol -> cat -> file
     In addition: Warning message:
     In file(file, ifelse(append, "a", "w")) :
     cannot open file '/tmp/RtmpDcIBap/RLIBS_5e0ea287caa/futile.matrix/unitTests/reportSummary.txt': Read-only file system
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 1.2.6
Check: tests
Result: ERROR
     Running ‘doRUnit.R’ [2s/3s]
    Running the tests in ‘tests/doRUnit.R’ failed.
    Complete output:
     > # From http://rwiki.sciviews.org/doku.php?id=developers:runit
     > ## unit tests will not be done if RUnit is not available
     >
     > # Unit tests are currently failing due to scoping issues
     > if(require("RUnit", quietly=TRUE)) {
     +
     + ## --- Setup ---
     +
     + pkg <- "futile.matrix" # <-- Change to name!
     + if(Sys.getenv("RCMDCHECK") == "FALSE") {
     + ## Path to unit tests for standalone running under Makefile (not R CMD check)
     + ## PKG/tests/../inst/unitTests
     + path <- file.path(getwd(), "..", "inst", "unitTests")
     + } else {
     + ## Path to unit tests for R CMD check
     + ## PKG.Rcheck/tests/../PKG/unitTests
     + path <- system.file(package=pkg, "unitTests")
     + }
     + cat("\nRunning unit tests\n")
     + print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
     +
     + library(package=pkg, character.only=TRUE)
     +
     + ## If desired, load the name space to allow testing of private functions
     + ## if (is.element(pkg, loadedNamespaces()))
     + ## attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
     + ##
     + ## or simply call PKG:::myPrivateFunction() in tests
     +
     + ## --- Testing ---
     +
     + ## Define tests
     + testSuite <- defineTestSuite(name=paste(pkg, "unit testing"),
     + dirs=path)
     + ## Run
     + tests <- runTestSuite(testSuite)
     +
     + ## Default report name
     + pathReport <- file.path(path, "report")
     +
     + ## Report to stdout and text files
     + cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
     + printTextProtocol(tests, showDetails=FALSE)
     + printTextProtocol(tests, showDetails=FALSE,
     + fileName=paste(pathReport, "Summary.txt", sep=""))
     + printTextProtocol(tests, showDetails=TRUE,
     + fileName=paste(pathReport, ".txt", sep=""))
     +
     + ## Report to HTML file
     + printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
     +
     + ## Return stop() to cause R CMD check stop in case of
     + ## - failures i.e. FALSE to unit tests or
     + ## - errors i.e. R errors
     + tmp <- getErrors(tests)
     + if(tmp$nFail > 0 | tmp$nErr > 0) {
     + stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
     + ", #R errors: ", tmp$nErr, ")\n\n", sep=""))
     + }
     + } else {
     + warning("cannot run unit tests -- package RUnit is not available")
     + }
    
     Running unit tests
     $pkg
     [1] "futile.matrix"
    
     $getwd
     [1] "/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/futile.matrix.Rcheck/tests"
    
     $pathToUnitTests
     [1] "/tmp/RtmpsaFyEM/RLIBS_5cb755c1da1/futile.matrix/unitTests"
    
    
    
     Executing test function test.cutoff_kernel_1 ... done successfully.
    
    
    
     Executing test function test.cutoff_kernel_2 ... done successfully.
    
    
    
     Executing test function test.fit.density_1 ... done successfully.
    
    
    
     Executing test function test.fit.density_2 ... done successfully.
    
    
    
     Executing test function test.max_eigen ... done successfully.
    
     ------------------- UNIT TEST SUMMARY ---------------------
    
     RUNIT TEST PROTOCOL -- Mon Feb 19 19:44:59 2018
     ***********************************************
     Number of test functions: 5
     Number of errors: 0
     Number of failures: 0
    
    
     1 Test Suite :
     futile.matrix unit testing - 5 test functions, 0 errors, 0 failures
     Error in file(file, ifelse(append, "a", "w")) :
     cannot open the connection
     Calls: printTextProtocol -> cat -> file
     In addition: Warning message:
     In file(file, ifelse(append, "a", "w")) :
     cannot open file '/tmp/RtmpsaFyEM/RLIBS_5cb755c1da1/futile.matrix/unitTests/reportSummary.txt': Read-only file system
     Execution halted
Flavor: r-release-linux-x86_64