8ba493fae64f39f193087d8670a6d2cf *DESCRIPTION
794c7d8db5aca74b174c38f2e337ca41 *NAMESPACE
27d6be737f067c255b7519c1250e05e3 *NEWS
5dc8a2c1d0d034dd79845921eb39beba *R/EMinfer.R
ff61acb1f4e0923c86a1b2b207634f5a *R/Gene_PPA.R
12529f19ddf9cdf45263d0cf2c020823 *R/Global.R
840fdb687658982f977bb872ee1d7ef2 *R/Liu_ld.R
548aa5dc6ebc9611fb3e159e3ad477ee *R/NetCen.R
eb8ef3421662350cdfce9398b6cde17a *R/NetVis.R
fc33d8d586180e1a43e1641fffe94c5c *R/Net_embedding.R
f2a9980b056d1a132e3170361098edd0 *R/Nmarkers_SimpleM.R
5f2be3e080c16c0cac592e7062e9fb80 *R/Nseg_chr.R
5abe9bc77b74ddcc5618c51330ecfd64 *R/PCA_Meff.R
30751a41f31650c5ad35cbb60f46f9fe *R/PleioChiTest.R
fa03021c0cfb1f45db13c45d60ea0580 *R/QTLenrich_plot.R
5bdd4f788393e6b377b740a39fecf068 *R/QTLmarkers.R
0c90b7c696340d99ab864bb6637562f5 *R/QTLwindows.R
bdab923dfe2ce24118cdf66bc49eb10b *R/WZ_ld.R
e74255d855179914f353d97e45c1b635 *R/autoStopCluster.R
4d2ee2b16407c6c573e6b91c42a22acc *R/find_genes_qtls_around_markers.R
e992f70ac117ee90df4d31e7e3a39bd9 *R/find_markers_genes.R
f27e3eb305ec4b7448330f5ef7b99b91 *R/gene_pval.R
2101baa5d21bd87e74a189c951549512 *R/gffQTLs.R
97b958ef0312d2f76606e234e7f46cad *R/gtfGenes.R
27ed854dd5b7f6d29ed922a66337a02f *R/import_gff_gtf.R
b172724509c7f5bc9bb4a8137a0e8a50 *R/inferCut.R
3a14f35cb959da66d7d6e5fcf52e002f *R/kde.R
2e076325278da1f7008010bec0e8e238 *R/meta_LD.R
490e4c2a02013f6fac256251b19c8acd *R/model.LR.R
8a2de3cea7b091ff63deb18615ce4d1d *R/model.M.R
2e8196ed37bd953f1902c547cef3cca6 *R/model.MVN.R
119cba437918eeb4af362a5047921290 *R/model.NB.R
c7d0a4b0719bd3d7907aebfb94a42b17 *R/model.proj.R
d54515faf8a36b5b1dc17f723431596c *R/overlapping_among_groups.R
380bd3d4a479f3ba44cf7469952efa2d *R/plot_overlapping.R
2662c539c6ead85a70d9fbbca620e1c9 *R/plot_qtl_info.R
a2ae331c3609c18aeecca54b42399b63 *R/qtl_enrich.R
d47dad541b59c5cc1f46fb6d428c5050 *R/relationship_plot.R
d05a333b89c1f848766a71b06edf8f1e *R/sLDA.R
0e3fc32c380c288a1cb7f1a4cb5f6412 *R/splitQTL_comment.R
53e4d1881ffdbad02bbfd986f57c8970 *R/sub_genes_markers.R
70f361aa65c6f4771d1196df9d6af5a2 *R/sub_genes_windows.R
ac508fe5a65fbbba0914ec6bf66d60cf *R/sub_qtlEnrich_chrom.R
fb6f6da06bafd49dba54cc4037bee308 *R/sub_qtlEnrich_geno.R
8ddc380c2610d4928e724c882ef2eb98 *R/sub_qtls_markers.R
e40f9c04e88c94dc60138a30362536fe *R/sub_qtls_windows.R
db113ab072023b81ac59baf856f8935d *README.md
76161b65639451c966be75488458b3c3 *build/partial.rdb
d6c417874ca2c4f1a56eb86abc88639c *build/vignette.rds
6d61a33a63c95d215f9fb800426a1fd9 *data/QTLmarkers.rda
23d840d1ca7c2675d130e9ee725ab20e *data/QTLwindows.rda
5f9067a4130b841b21665b2d641b0b5c *data/gffQTLs.rda
7ca0481b7bdc6401e66747250e8bc16d *data/gtfGenes.rda
1b2773a4684bb0ece927bf51dfc51925 *inst/CITATION
fcbcfe75e00ba938ba8420932bf03fd5 *inst/doc/GALLO.R
1a2027adfdb461e16ceeec5250174db9 *inst/doc/GALLO.Rmd
d40bd3d94e8f1b8705dee2208a9360ae *inst/doc/GALLO.html
395617041ed0f1d2b72fb0c8473d0f3c *inst/extdata/example.gff
4a13537801e76fde8113d4f5ef9c42bf *inst/python/net_embedding_R.py
48d2214dbcac3518a4ed8b74174e4909 *man/EMinfer.Rd
64cabc36522634c9d6aeac94b4778cea *man/Gene_PPA.Rd
5a735c45e782b3b002b19224fe27583b *man/Global.Rd
104d488d8d33a4a3d20bb75a1450fb29 *man/Liu_ld.Rd
1456b10b93ce458b2cfd2fed1ada2b3a *man/NetCen.Rd
5a456baad99210a6ed5da313e00d557c *man/NetVis.Rd
887c715de9050c9ff2878c72519f065c *man/Net_embedding.Rd
e382a21a8b6fdf3193cc557e142244fe *man/Nmarkers_SimpleM.Rd
821003d8a389d7528a2483fb6c68fb49 *man/Nseg_chr.Rd
6cac4d047c8d0adf14f0d16ba3b3b18b *man/PCA_Meff.Rd
946a703b72785f2bb979587ca856ae86 *man/PleioChiTest.Rd
5ea3905bf10a786b0b3bc8ed78d73497 *man/QTLenrich_plot.Rd
8b8b6d73246a510ebbecb35eb574ad6f *man/QTLmarkers.Rd
a1bd0ca59a1e77700b6cbd3209822dcd *man/QTLwindows.Rd
08867bedef8bab074082e1f5e8aa4847 *man/WZ_ld.Rd
38458d624dd15643b0dc6f65fe4af631 *man/autoStopCluster.Rd
5d69f512ddbad56f2666b4786e15d8ed *man/find_genes_qtls_around_markers.Rd
ca193b08ac53a08e653c28ec7cae4f36 *man/find_markers_genes.Rd
4a550340372c4a2b7c78c70242c99576 *man/gene_pval.Rd
69275e043b68d743bc1226f32940dc71 *man/gffQTLs.Rd
4ddd224ccc190885ddcfe3c29e86b0c5 *man/gtfGenes.Rd
9c1fcf52e8d60ccd87b0e8a0b173a7fb *man/import_gff_gtf.Rd
baf004195537a17956850c2d52a4f266 *man/inferCut.Rd
522275c8f119a4a81ec47099b5e823c1 *man/kde.Rd
f4ca11bea78f20edcdd31ec87896c82c *man/meta_LD.Rd
39ebb179954116b00a5b0baeb26065a2 *man/model.LR.Rd
c7b229e6188e572f6275eb9b9acf8fc9 *man/model.M.Rd
763ae459b700e5c1b2912d2bfd43a61f *man/model.MVN.Rd
628ab8186c24d1154ebfa0a174462083 *man/model.NB.Rd
939849e6a12ec01e9033acccbd3377b4 *man/model.proj.Rd
cc58888d947612853439d67610dfb92e *man/overlapping_among_groups.Rd
01be864cc95a30d6b7e131dff38e062c *man/plot_overlapping.Rd
74b39a32558185358c72263d9c6df86f *man/plot_qtl_info.Rd
f3ddcfeda738ee2a513ff76e40699673 *man/qtl_enrich.Rd
e39b3a1540203c931c6e5ac156e070c0 *man/relationship_plot.Rd
c51a93622b0a2e34f9a9e0eab60843c7 *man/sLDA.Rd
6c9afb6c07097d0ac033c2d618097e46 *man/splitQTL_comment.Rd
157f795ba6c85e91f4133f1f0f977654 *man/sub_genes_markers.Rd
db25a9e16e247a9a3b1722fb58cca0de *man/sub_genes_windows.Rd
c89e02082c7d9e3d7f5b3299b1c82fc5 *man/sub_qtlEnrich_chrom.Rd
ef3f17746f509310a48616f48b61b384 *man/sub_qtlEnrich_geno.Rd
62504ef7fe8a9d214cbb4218aaa6de44 *man/sub_qtl_markers.Rd
a57b84c9c9f94dfdeb5eb60d61eeb700 *man/sub_qtl_windows.Rd
cb8f5f44400851744bf1da2f288f0fdf *vignettes/Exterior.png
1a2027adfdb461e16ceeec5250174db9 *vignettes/GALLO.Rmd
998f5028af799e113471be397a7ffece *vignettes/Health.png
48300f6138647d284d285b92dced91af *vignettes/Meat_and_Carcass.png
7b9d98e6839494aef3c4a8c1ab6fcffd *vignettes/Milk.png
4ddcb8e23fbbc02d69cc00192cf8e63c *vignettes/Production.png
6393cb3ad43a94a5be8fa3e5b2e64ec1 *vignettes/Reproduction.png
