097b3b7e95ed4f3b02207ea141b6fba6 *DESCRIPTION
7959010311fe98b87c2adce6140460e8 *NAMESPACE
3cfd93a7b8d154e0e972652787d75cb6 *R/c_truncauchy.R
733a335df0ad5e854ea672d919aa0965 *R/concatNexus.R
233a8f386c43c8314013eda9cab56b84 *R/conflate.R
caa061fab62244b9be11712425761ed3 *R/crossplot.R
cf356266ef7d1f6521618e0a510443e0 *R/data.R
addbc0fff820ba27b2b47bd0a469c9f9 *R/fasta2nexus.R
8959920499129f37495aac2d5b7d4b5b *R/findParams.R
a5a3d7ad693b52c7683bc9c9ad77b289 *R/lognormalBeast.R
e738469d4a5bca9b17d5d987ed447bcf *R/measureSimil.R
2e6c0352e80adbee73a563487fd5c71b *R/mswd.test.R
aa835b82c786fb7a25a6d04c698dd81d *R/stratCI.R
4ed3f10b355a0600d96d50ff23a5d35b *R/summaryBrlen.R
b1a751a1b8caea4fc3ec665aeb415aaf *R/table2nexus.R
c61d6757692c8af0210b9a9c06b6a0b2 *R/tbea-package.R
f83aad1bb3daad2b2c708640af4aa6c8 *R/tnt2newick.R
de4bdc4a3372daf36b11e7c7c1351fad *R/topoFreq.R
9daceccf15488765d7cfaac8db84a1fa *R/xintercept.R
b6c98517f1799f86dd86b942679ed65a *README.md
1bf18d9c216b8d95033f0bd2fe2906b2 *build/partial.rdb
1c4dac0568763e9152189c7fc7399754 *build/vignette.rds
61cbf0dfab457348e3fe20a77fd8a93d *data/andes.rda
bbfa2c30cd95c7ed416c2a63bb6e1071 *data/cynodontidae.posterior.rda
359fc9ddac3844501e04e33144138571 *data/cynodontidae.prior.rda
e9915c6c2aff6c3be7a8962d69f43565 *data/laventa.rda
a33613f97f5528f6598bbbc6b797ee47 *inst/doc/concatenation.R
3a536f5ae287c8fe293c119ef944e819 *inst/doc/concatenation.Rmd
93741eb5c7d3f8c1ef95d5aa16cf02b3 *inst/doc/concatenation.html
cce262d98304d8b81f2c44d0d09db10f *inst/doc/conflation.R
1990e196fa0cb153e11babe9a7dd3799 *inst/doc/conflation.Rmd
8823fcde0a65b0a213c90336edaac6c9 *inst/doc/conflation.html
1f71107482f81131b4e53a2b189e8c3f *inst/doc/intro.R
412125621734fcaeede5cf2da0dd20f7 *inst/doc/intro.Rmd
b8cbba8f24b46c492d21deff214c5d3c *inst/doc/intro.html
33121a4399ebd9647a04af136a910f34 *inst/doc/l_calibration_mcmctree.R
1d6d907946aec4f1354dcc12b292dacf *inst/doc/l_calibration_mcmctree.Rmd
8e89226b4b5a3bdcae1785a29c7c01ea *inst/doc/l_calibration_mcmctree.html
bce80015d98988580ef878a4269ce87d *inst/doc/node_calibration_density.R
953b4053115edc5eab9b1bcdeefd5ef5 *inst/doc/node_calibration_density.Rmd
ec97efb04713aa291e2ab214efb58629 *inst/doc/node_calibration_density.html
09dfa3a6a5a15779ae10184b7b6c5ddc *inst/doc/posterior_tree_distribution.R
92b2be0be240c501f36912e2170edf96 *inst/doc/posterior_tree_distribution.Rmd
6104c88fa36c6a6007b0fd206246e8b1 *inst/doc/posterior_tree_distribution.html
7e043eb942a2c0686d840ed08e1c1f4d *inst/doc/prior_posterior_comparisons.R
b51510c13abe31466c90e7033cd24540 *inst/doc/prior_posterior_comparisons.Rmd
9872412db27d010b3248cab6dd782b87 *inst/doc/prior_posterior_comparisons.html
9c0ecc3c1e7fedafcecceacd301187a5 *inst/doc/starting_tree.R
a254b06930ed9558e9a49d98d6d01b75 *inst/doc/starting_tree.Rmd
10c56063447316b1eb1a0253ace48fc1 *inst/doc/starting_tree.html
cbac340d8bd8bb9c947960beb3e99ce9 *inst/doc/stratigraphic_intervals.R
c2386dde2b8ae2e2405c7a14060509a8 *inst/doc/stratigraphic_intervals.Rmd
f8e0e3b02821acd8b515dad696c302f5 *inst/doc/stratigraphic_intervals.html
bf34e7e2a7713dff402667a30fd0d42d *inst/doc/whyInitVals.R
bcdc71fb65ceae1494315fca47dc5666 *inst/doc/whyInitVals.Rmd
385e05d7cc48cc4c1eee56087087af85 *inst/doc/whyInitVals.html
67735f224fbf9420a2eb4de3da3f8c14 *inst/doc/x_intercept.R
38133bacd97cdd0b66b00777515a273a *inst/doc/x_intercept.Rmd
802c6e0032fed079d6668c81bf094db5 *inst/doc/x_intercept.html
9aa24bf15a2a1d9e5993cd5881fccd24 *man/andes.Rd
ef1f4332d7c931137b30881cbcda5a18 *man/c_truncauchy.Rd
ac97c71a0a4e286d4e5acf254b29f520 *man/concatNexus.Rd
ab7c1a697a06f3207f79b7d006e86905 *man/conflate.Rd
27d40137bdba0c3080f274326f20bbbb *man/crossplot.Rd
d22f525443f481289f60b2d4a2c989ab *man/cynodontidae.posterior.Rd
b57e857222a970e51567bdd6bff137d7 *man/cynodontidae.prior.Rd
8d251569dd791ea6aacde4879cfcd897 *man/density_fun.Rd
1cd60dc22364f1d54f5e23dc49cbe632 *man/fasta2nexus.Rd
7115cbee2d5a7946c33e04e82b908f06 *man/findParams.Rd
3c0f738ecb0a33bc78e282e2050cb99f *man/laventa.Rd
b4b6d05abe26c93516b338985ba25202 *man/lognormalBeast.Rd
b6bb9be7c551cc6df3812412f7cec143 *man/measureSimil.Rd
03ac51c781b2eb1c97859a2048ad19bd *man/mswd.test.Rd
6a70a60bab42d24cf5ffde4b98dd8f80 *man/quantile_conflation.Rd
411462e412f3cac8647f779092871757 *man/stratCI.Rd
18e74884319404eaecfebf65fea643c8 *man/summaryBrlen.Rd
063530b18bf3e72aad77aedf11252561 *man/table2nexus.Rd
cd48bba9de77737e355eb1fdd9453f61 *man/tbea-package.Rd
e653c3fde171cfc6076cc708fa211a33 *man/tnt2newick.Rd
a8eb83e1b60d23312a54a82e31c32d0c *man/topoFreq.Rd
152eb5a718a6047332ba1a364a2164a3 *man/xintercept.Rd
1b047e9d9f9487dd9ea5a455ee7ba34a *tests/testthat.R
0ced4853b6641d8e6d463aa54677c347 *tests/testthat/test-c_truncauchy.R
068efd6bb7e1328d28d7558235b831b6 *tests/testthat/test-fasta2nexus.R
626f23c81d1e543bb9724d1b352a5f10 *tests/testthat/test-findParams.R
efdeaa8f3d2398c98554c45b63379254 *tests/testthat/test-lognormalBeast.R
9fc763e31551fac18657613f0dcec536 *tests/testthat/test-measureSimil.R
10271515bf22b17db75c7c36bc1d4d60 *tests/testthat/test-mswd.R
1f90e8c4a068237ee06cfb70374c8773 *tests/testthat/test-tnt2newick.R
61c0a199cd1ffa6090ce7058c7785ab5 *tests/testthat/test-topoFreq.R
3a536f5ae287c8fe293c119ef944e819 *vignettes/concatenation.Rmd
1990e196fa0cb153e11babe9a7dd3799 *vignettes/conflation.Rmd
412125621734fcaeede5cf2da0dd20f7 *vignettes/intro.Rmd
1d6d907946aec4f1354dcc12b292dacf *vignettes/l_calibration_mcmctree.Rmd
953b4053115edc5eab9b1bcdeefd5ef5 *vignettes/node_calibration_density.Rmd
92b2be0be240c501f36912e2170edf96 *vignettes/posterior_tree_distribution.Rmd
b51510c13abe31466c90e7033cd24540 *vignettes/prior_posterior_comparisons.Rmd
a254b06930ed9558e9a49d98d6d01b75 *vignettes/starting_tree.Rmd
c2386dde2b8ae2e2405c7a14060509a8 *vignettes/stratigraphic_intervals.Rmd
bcdc71fb65ceae1494315fca47dc5666 *vignettes/whyInitVals.Rmd
38133bacd97cdd0b66b00777515a273a *vignettes/x_intercept.Rmd
