Last updated on 2025-06-06 18:49:41 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.11 | 7.31 | 56.64 | 63.95 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.11 | 5.19 | 41.69 | 46.88 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.11 | 110.05 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.11 | 117.81 | OK | |||
| r-devel-windows-x86_64 | 1.0.11 | 10.00 | 0.00 | 10.00 | FAIL | |
| r-patched-linux-x86_64 | 1.0.11 | 7.57 | 53.27 | 60.84 | OK | |
| r-release-linux-x86_64 | 1.0.11 | 6.64 | 52.47 | 59.11 | OK | |
| r-release-macos-arm64 | 1.0.11 | 42.00 | OK | |||
| r-release-macos-x86_64 | 1.0.11 | 79.00 | OK | |||
| r-release-windows-x86_64 | 1.0.11 | 10.00 | 79.00 | 89.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.11 | 38.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.11 | 56.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.0.11 | 12.00 | 91.00 | 103.00 | OK |
Version: 1.0.11
Check: re-building of vignette outputs
Result: FAIL
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:
> ##D PACVr.complete(gbkFile=gbkFile, bamFile=bamFile, windowSize=250, logScale=FALSE,
> ##D threshold=0.5, IRCheck=1, relative=TRUE, textSize=0.5,
> ##D tabularCovStats=FALSE, output=outFile)
> ## End(Not run)
> ## Not run:
> ##D gbkFile <- system.file("extdata", "MG936619/MG936619.gb", package="PACVr")
> ##D bamFile <- system.file("extdata", "MG936619/MG936619_subsampled.bam", package="PACVr")
> ##D outFile <- paste(tempdir(), "/MG936619_CoverageViz.pdf", sep="")
> ##D PACVr.complete(gbkFile=gbkFile, bamFile=bamFile, windowSize=50, logScale=FALSE,
> ##D threshold=0.5, IRCheck=NA, relative=TRUE, textSize=0.5,
> ##D tabularCovStats=FALSE, output=outFile)
> ## End(Not run)
>
>
>
> ### * <FOOTER>
> ###
> cleanEx()
> options(digits = 7L)
> base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
Time elapsed: 0.78 0.1 0.89 NA NA
> grDevices::dev.off()
null device
1
> ###
> ### Local variables: ***
> ### mode: outline-minor ***
> ### outline-regexp: "\\(> \\)?### [*]+" ***
> ### End: ***
> quit('no')
======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-devel-windows-x86_64