Last updated on 2025-12-13 05:52:25 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 50.22 | 466.47 | 516.69 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 0.29 | 2.11 | 2.40 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 163.00 | 770.88 | 933.88 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 92.00 | 404.80 | 496.80 | ERROR | |
| r-devel-windows-x86_64 | 0.1.0 | 68.00 | 410.00 | 478.00 | OK | |
| r-patched-linux-x86_64 | 0.1.0 | 47.49 | 448.06 | 495.55 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 46.79 | 447.62 | 494.41 | OK | |
| r-release-macos-arm64 | 0.1.0 | 18.00 | 99.00 | 117.00 | ERROR | |
| r-release-macos-x86_64 | 0.1.0 | 56.00 | 324.00 | 380.00 | OK | |
| r-release-windows-x86_64 | 0.1.0 | 81.00 | 413.00 | 494.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | 7.00 | 15.00 | 22.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.1.0 | 59.00 | 356.00 | 415.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.0 | 69.00 | 543.00 | 612.00 | OK |
Version: 0.1.0
Check: package dependencies
Result: ERROR
Packages required but not available:
'DR.SC', 'PRECAST', 'ProFAST', 'Seurat'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in ‘coFAST-Ex.R’ failed
The error most likely occurred in:
> ### Name: NCFM
> ### Title: Cell-feature coembedding for scRNA-seq data
> ### Aliases: NCFM
>
> ### ** Examples
>
> data(pbmc3k_subset)
> pbmc3k_subset <- NCFM(pbmc3k_subset)
Error:
! The `slot` argument of `GetAssayData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. └─coFAST::NCFM(pbmc3k_subset)
2. ├─base::as.matrix(...)
3. ├─Seurat::GetAssayData(object = object, slot = slot, assay = assay)
4. └─SeuratObject:::GetAssayData.Seurat(...)
5. └─SeuratObject::.Deprecate(...)
6. └─lifecycle::deprecate_stop(...)
7. └─lifecycle:::deprecate_stop0(msg)
8. └─rlang::cnd_signal(...)
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64
Version: 0.1.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘scater’
Flavor: r-oldrel-macos-arm64
Version: 0.1.0
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavor: r-oldrel-macos-arm64