Last updated on 2025-10-11 18:48:41 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.21 | 256.80 | 270.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.41 | 227.58 | 238.99 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.03 | 250.02 | 263.05 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 183.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 213.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/133s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.544, system: 0.055, elapsed: 2.154 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.111, system: 0.170, elapsed: 11.758 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.015, elapsed: 0.253 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.889, system: 0.275, elapsed: 5.845 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.008, elapsed: 0.263 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.435, system: 0.549, elapsed: 21.006 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.571, system: 0.056, elapsed: 2.403 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.147, system: 0.203, elapsed: 18.417 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.463 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.850, system: 0.196, elapsed: 10.285 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.362 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.461, system: 0.500, elapsed: 33.115 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.661, system: 0.063, elapsed: 2.704 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.219, system: 0.234, elapsed: 13.336 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.016, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.869, system: 0.281, elapsed: 5.622 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.007, elapsed: 0.224 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.162, system: 0.248, elapsed: 1.134 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.870, system: 0.883, elapsed: 24.234 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.678, system: 0.086, elapsed: 2.392 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.361, system: 0.345, elapsed: 15.459 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.402 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.789, system: 0.195, elapsed: 10.238 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.491 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.289, system: 0.489, elapsed: 17.378 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.107, system: 1.168, elapsed: 47.603 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/141s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.537, system: 0.045, elapsed: 3.040 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.983, system: 0.086, elapsed: 17.724 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.014, elapsed: 0.367 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.471, system: 0.166, elapsed: 5.878 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.006, elapsed: 0.294 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.875, system: 0.342, elapsed: 28.363 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.483, system: 0.025, elapsed: 3.078 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.908, system: 0.067, elapsed: 17.778 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.012, elapsed: 0.416 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.629, system: 0.157, elapsed: 7.155 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.006, elapsed: 0.288 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.907, system: 0.306, elapsed: 29.855 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.487, system: 0.033, elapsed: 2.645 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.932, system: 0.075, elapsed: 15.552 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.010, elapsed: 0.312 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.432, system: 0.164, elapsed: 6.718 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.015, elapsed: 0.392 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.042, system: 0.255, elapsed: 1.231 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.854, system: 0.586, elapsed: 27.917 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.501, system: 0.032, elapsed: 3.063 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.964, system: 0.075, elapsed: 17.300 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.392 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.630, system: 0.182, elapsed: 6.748 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.229 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.011, system: 0.532, elapsed: 16.932 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.102, system: 0.865, elapsed: 45.873 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64