Last updated on 2025-11-03 17:49:54 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.75 | 244.69 | 257.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.68 | 268.38 | 279.06 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 181.00 | 191.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 15.00 | 182.00 | 197.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/136s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.683, system: 0.069, elapsed: 2.673 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.631, system: 0.214, elapsed: 14.831 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.019, elapsed: 0.346 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.044, system: 0.274, elapsed: 6.541 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.008, elapsed: 0.260 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.299, system: 0.617, elapsed: 25.558 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.739, system: 0.074, elapsed: 2.499 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.539, system: 0.145, elapsed: 14.550 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.012, elapsed: 0.294 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.958, system: 0.204, elapsed: 6.817 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.349 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.174, system: 0.466, elapsed: 25.368 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.677, system: 0.042, elapsed: 2.917 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.793, system: 0.397, elapsed: 14.810 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.021, elapsed: 0.358 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.235, system: 0.329, elapsed: 7.266 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.005, elapsed: 0.417 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.224, system: 0.225, elapsed: 1.458 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.935, system: 1.051, elapsed: 28.337 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.034, elapsed: 2.774 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.673, system: 0.127, elapsed: 15.062 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.013, elapsed: 0.362 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.973, system: 0.188, elapsed: 6.859 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.005, elapsed: 0.304 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.975, system: 0.509, elapsed: 21.986 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.264, system: 0.914, elapsed: 48.534 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/130s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.589, system: 0.044, elapsed: 2.724 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.441, system: 0.080, elapsed: 14.899 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.014, elapsed: 0.362 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.748, system: 0.193, elapsed: 6.063 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.008, elapsed: 0.246 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.701, system: 0.362, elapsed: 25.245 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.546, system: 0.037, elapsed: 2.156 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.438, system: 0.062, elapsed: 15.668 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.010, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.920, system: 0.179, elapsed: 7.442 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.005, elapsed: 0.291 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.810, system: 0.323, elapsed: 26.683 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.627, system: 0.040, elapsed: 2.989 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.450, system: 0.085, elapsed: 14.856 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.011, elapsed: 0.280 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.780, system: 0.194, elapsed: 6.182 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.018, elapsed: 0.271 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.097, system: 0.256, elapsed: 0.915 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.968, system: 0.643, elapsed: 26.608 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.667, system: 0.053, elapsed: 2.388 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.594, system: 0.112, elapsed: 16.012 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.780, system: 0.181, elapsed: 5.728 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.005, elapsed: 0.269 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.669, system: 0.626, elapsed: 17.662 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.732, system: 1.023, elapsed: 43.343 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64