Last updated on 2025-08-19 06:48:33 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.23 | 241.49 | 254.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.89 | 241.87 | 252.76 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.74 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 195.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.41 | 283.28 | 297.69 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.83 | 270.65 | 283.48 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 170.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 154.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/113s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.517, system: 0.040, elapsed: 2.134 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.924, system: 0.087, elapsed: 12.165 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.013, elapsed: 0.271 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.617, system: 0.187, elapsed: 4.929 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.260 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.931, system: 0.354, elapsed: 20.524 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.510, system: 0.034, elapsed: 2.651 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.926, system: 0.084, elapsed: 14.706 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.652, system: 0.158, elapsed: 6.194 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.247 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.970, system: 0.312, elapsed: 24.977 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.603, system: 0.040, elapsed: 2.837 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.951, system: 0.075, elapsed: 14.840 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.010, elapsed: 0.287 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.693, system: 0.170, elapsed: 5.346 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.227 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.144, system: 0.211, elapsed: 1.028 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.367, system: 0.532, elapsed: 25.506 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.515, system: 0.034, elapsed: 2.134 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.882, system: 0.077, elapsed: 12.255 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.718, system: 0.172, elapsed: 5.243 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.237 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.122, system: 0.458, elapsed: 14.374 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.233, system: 0.787, elapsed: 35.445 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/100s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.516, system: 0.049, elapsed: 2.211 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.817, system: 0.075, elapsed: 12.241 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.013, elapsed: 0.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.466, system: 0.195, elapsed: 3.865 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.004, elapsed: 0.176 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.656, system: 0.355, elapsed: 19.384 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.486, system: 0.027, elapsed: 1.931 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.824, system: 0.069, elapsed: 12.691 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.010, elapsed: 0.250 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.607, system: 0.162, elapsed: 4.908 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.804, system: 0.296, elapsed: 20.761 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.485, system: 0.027, elapsed: 1.946 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.820, system: 0.057, elapsed: 9.960 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.176, system: 0.009, elapsed: 0.186 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.172, system: 0.137, elapsed: 3.338 seconds]
Computing values for grid cells...
... done. [user: 0.150, system: 0.004, elapsed: 0.154 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.025, system: 0.213, elapsed: 0.888 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.421, system: 0.482, elapsed: 17.161 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.521, system: 0.041, elapsed: 2.262 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.982, system: 0.179, elapsed: 13.416 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.014, elapsed: 0.266 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.560, system: 0.208, elapsed: 5.692 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.214 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.878, system: 0.416, elapsed: 12.923 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.906, system: 0.895, elapsed: 35.690 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64