Last updated on 2025-12-25 05:49:07 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.18 | 244.11 | 257.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.79 | 210.29 | 220.08 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 186.00 | 208.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.19 | 283.55 | 298.74 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 433.00 | 445.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 631.00 | 644.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [104s/317s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.862, system: 0.122, elapsed: 7.325 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.524, system: 0.582, elapsed: 31.864 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.042, elapsed: 0.856 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 5.216, system: 0.928, elapsed: 12.347 seconds]
Computing values for grid cells...
... done. [user: 0.205, system: 0.018, elapsed: 0.567 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.773, system: 2.133, elapsed: 56.823 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.962, system: 0.165, elapsed: 7.254 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.208, system: 0.389, elapsed: 53.805 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.040, elapsed: 1.220 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 5.336, system: 0.973, elapsed: 25.227 seconds]
Computing values for grid cells...
... done. [user: 0.212, system: 0.022, elapsed: 0.897 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.651, system: 1.959, elapsed: 92.653 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.897, system: 0.131, elapsed: 7.418 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.387, system: 0.529, elapsed: 35.655 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.039, elapsed: 1.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 5.250, system: 1.000, elapsed: 16.534 seconds]
Computing values for grid cells...
... done. [user: 0.204, system: 0.026, elapsed: 0.445 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.423, system: 0.432, elapsed: 2.383 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.255, system: 2.659, elapsed: 68.548 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.938, system: 0.164, elapsed: 2.899 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.256, system: 0.576, elapsed: 26.982 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.042, elapsed: 1.010 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.911, system: 0.692, elapsed: 15.300 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.010, elapsed: 0.414 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.103, system: 1.133, elapsed: 32.558 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.418, system: 2.988, elapsed: 82.141 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [103s/475s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.943, system: 0.131, elapsed: 10.707 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.349, system: 0.366, elapsed: 46.167 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.033, elapsed: 1.070 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.911, system: 0.820, elapsed: 25.011 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.016, elapsed: 0.696 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.358, system: 1.833, elapsed: 88.845 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.825, system: 0.089, elapsed: 8.429 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.283, system: 0.337, elapsed: 46.048 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.036, elapsed: 1.028 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.759, system: 0.768, elapsed: 24.990 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.011, elapsed: 0.951 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.014, system: 1.698, elapsed: 86.843 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.778, system: 0.100, elapsed: 8.264 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.259, system: 0.320, elapsed: 50.402 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.035, elapsed: 1.199 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.863, system: 0.857, elapsed: 26.511 seconds]
Computing values for grid cells...
... done. [user: 0.201, system: 0.019, elapsed: 0.933 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.367, system: 0.478, elapsed: 4.064 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.545, system: 2.269, elapsed: 97.096 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.793, system: 0.091, elapsed: 9.030 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.231, system: 0.371, elapsed: 45.600 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.038, elapsed: 1.058 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.956, system: 1.120, elapsed: 33.308 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.014, elapsed: 0.999 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.012, system: 1.601, elapsed: 73.934 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.242, system: 3.723, elapsed: 169.230 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64