Last updated on 2025-11-06 05:50:02 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.73 | 259.99 | 272.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.01 | 218.21 | 228.22 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 260.60 | 275.78 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 176.00 | 188.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 168.00 | 178.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/129s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.049, elapsed: 2.206 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.585, system: 0.183, elapsed: 12.967 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.019, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.064, system: 0.279, elapsed: 6.131 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.006, elapsed: 0.245 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.122, system: 0.561, elapsed: 22.627 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.732, system: 0.079, elapsed: 2.321 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.815, system: 0.263, elapsed: 14.290 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.016, elapsed: 0.349 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.116, system: 0.260, elapsed: 6.992 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.008, elapsed: 0.312 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.607, system: 0.657, elapsed: 25.179 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.766, system: 0.075, elapsed: 2.742 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.658, system: 0.230, elapsed: 14.230 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.012, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.797, system: 0.186, elapsed: 5.416 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.270 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.290, system: 0.273, elapsed: 1.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.509, system: 0.809, elapsed: 25.227 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.824, system: 0.108, elapsed: 2.698 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.950, system: 0.388, elapsed: 17.229 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.019, elapsed: 0.307 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.032, system: 0.262, elapsed: 7.304 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.283 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.900, system: 0.506, elapsed: 18.929 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.788, system: 1.337, elapsed: 47.910 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/117s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.784, system: 0.074, elapsed: 2.824 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.602, system: 0.249, elapsed: 14.706 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.020, elapsed: 0.298 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.938, system: 0.294, elapsed: 6.070 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.011, elapsed: 0.216 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.266, system: 0.679, elapsed: 24.997 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.834, system: 0.084, elapsed: 2.445 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.590, system: 0.256, elapsed: 11.541 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.014, elapsed: 0.219 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.758, system: 0.234, elapsed: 4.330 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.022, elapsed: 0.361 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.115, system: 0.664, elapsed: 19.645 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.729, system: 0.080, elapsed: 2.019 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.482, system: 0.253, elapsed: 13.169 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.015, elapsed: 0.336 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.833, system: 0.221, elapsed: 5.335 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.016, elapsed: 0.290 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.157, system: 0.265, elapsed: 1.244 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.213, system: 0.895, elapsed: 23.270 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.603, system: 0.037, elapsed: 1.956 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.671, system: 0.107, elapsed: 15.132 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.011, elapsed: 0.260 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.780, system: 0.169, elapsed: 5.472 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.005, elapsed: 0.364 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.770, system: 0.475, elapsed: 17.186 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.859, system: 0.836, elapsed: 41.411 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64