Implements a method to combine multiple levels of multiple
sequence alignment to uncover the structure of complex DNA rearrangements.
| Version: |
0.10.5 |
| Depends: |
R (≥ 4.4) |
| Imports: |
methods, graphics, grDevices, oompaBase, Biostrings, NameNeedle, dendextend, ape, stringr, igraph, Polychrome, colorspace |
| Suggests: |
msa, viridisLite, R.rsp, knitr, rmarkdown |
| Published: |
2026-09-25 |
| DOI: |
10.32614/CRAN.package.SVAlignR |
| Author: |
Kevin R. Coombes [aut, cre] |
| Maintainer: |
Kevin R. Coombes <krc at silicovore.com> |
| License: |
Apache License (== 2.0) |
| URL: |
http://silicovore.com/OOMPA/clonefinder.html |
| NeedsCompilation: |
no |
| CRAN checks: |
SVAlignR results |