dsem: Dynamic Structural Equation Models
Applies dynamic structural equation models to time-series data with generic and simplified specification for simultaneous and lagged effects. Methods are described in Thorson et al. (2024) "Dynamic structural equation models synthesize ecosystem dynamics constrained by ecological mechanisms."
| Version: | 1.6.0 |
| Depends: | R (≥ 4.0.0) |
| Imports: | TMB, Matrix, sem, igraph, utils, RTMB (≥ 1.7.0), ggraph, ggplot2, grid, methods, stats |
| LinkingTo: | TMB, RcppEigen |
| Suggests: | knitr, AER, phylopath, rmarkdown, reshape, gridExtra, dynlm, MARSS, ggpubr, vars, testthat, DHARMa |
| Enhances: | rstan, tmbstan |
| Published: | 2025-03-22 |
| Author: | James Thorson 
[aut, cre],
Maurice Goodman
[ctb],
Wouter van der Bijl
[ctb]
(template for d-separation test),
Giovanni M. Marchetti [ctr] (creator of ggm, from which functions are
copied to avoid dependency on package graph not on CRAN) |
| Maintainer: | James Thorson <James.Thorson at noaa.gov> |
| BugReports: | https://github.com/James-Thorson-NOAA/dsem/issues |
| License: | GPL-3 |
| URL: | https://james-thorson-noaa.github.io/dsem/ |
| NeedsCompilation: | yes |
| Citation: | dsem citation info |
| Materials: | README NEWS |
| CRAN checks: | dsem results |
Documentation:
| Reference manual: | dsem.pdf |
| Vignettes: |
Dynamic factor analysis (source, R code) Spatial diffusion (source, R code) Demonstration of selected features (source, R code) |
Downloads:
| Package source: | dsem_1.6.0.tar.gz |
| Windows binaries: | r-devel: dsem_1.5.0.zip, r-release: dsem_1.6.0.zip, r-oldrel: dsem_1.3.0.zip |
| macOS binaries: | r-devel (arm64): dsem_1.6.0.tgz, r-release (arm64): dsem_1.6.0.tgz, r-oldrel (arm64): dsem_1.4.0.tgz, r-devel (x86_64): dsem_1.6.0.tgz, r-release (x86_64): dsem_1.6.0.tgz, r-oldrel (x86_64): dsem_1.3.0.tgz |
| Old sources: | dsem archive |
Reverse dependencies:
| Reverse suggests: | tinyVAST |
Linking:
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