ubms 1.2.8
- Add probs argument to summary method
- Fix deprecated arma::is_finite warnings from CRAN
- Minor bugfixes
ubms 1.2.7
- Package links now go to biodiverse Github org
- Use reformulas instead of lme4
- Return eta from ranef when submodel has spatial component
- Support terra format rasters in predict
- Minor bugfixes
ubms 1.2.6
ubms 1.2.5
- Fix issue with version number not being a string
- Adding missing roxygen tag
ubms 1.2.4
- Adjust Makevars to fix problems with clang 16
ubms 1.2.3
- Fix bug in Stan code revealed by new StanHeaders
- Drop C++ specification per CRAN instructions
- Remove deprecated ggplot2 functions
- Small updates to overview vignette
ubms 1.2.2
- Fix broken URLs in vignettes
- New kfold function
- Add ability to not save log likelihoods in posterior
- Add new Laplace prior (thanks Justin Cally)
- Better handling of factors with levels that don’t appear in
data
- Fix CRAN clang warnings
- Misc. bugfixes
ubms 1.1.0
- Support for restricted spatial regression (RSR)
- Add vignette for RSR
- Update default priors and allow setting custom priors
- Support for offsets
- New utility functions and bugfixes
ubms 1.0.2
- Make default priors less informative
- Fix issues in
sim_z C++ code that triggered clang-UBSAN
errors
- Fix various minor issues with checks/tests on R-oldrel
ubms 1.0.1
- Added vignette comparing ubms and JAGS output
- Added configuration for pkgdown site
- Small adjustments to wording in DESCRIPTION and docs for CRAN
submission
ubms 0.1.9
- Add time-to-detection occupancy model
(
stan_occuTTD)
- Wrote examples for all fitting functions
- Many new tests added
- Wrote a vignette demonstrating random effects
ubms 0.1.8
- Added distance-sampling model (
stan_distsamp)
- Added multinomial-Poisson mixture model
(
stan_multinomPois)
- Wrote overview vignette
ubms 0.1.4
- Added dynamic occupancy model (
stan_colext)
- Consolidated single-season models into one Stan file to speed up
compilation
- Using rasters as
predict input is now supported